Transcript: ENSPTRT00000012904.5 TP53BP1-203

Description

tumor protein p53 binding protein 1 [Source:VGNC Symbol;Acc:VGNC:1588]

Location

Chromosome 15: 23,994,296-24,079,377 reverse strand.

About this transcript

This transcript has 27 exons, is annotated with 66 domains and features and maps to 786 oligo probes.

Gene

This transcript is a product of gene ENSPTRG00000006994.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000105167.1	TP53BP1-201	10360	1977aa	ENSPTRP00000067532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RS52	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000097654.1	TP53BP1-202	10514	1972aa	ENSPTRP00000074863.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SCV0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000012904.5	TP53BP1-203	5877	1958aa	ENSPTRP00000011947.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2Q9A7	-
ENSPTRT00000086652.1	TP53BP1-204	5784	1927aa	ENSPTRP00000080110.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SU67	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 27, Coding exons: 27, Transcript length: 5,877 bps, Translation length: 1,958 residues

Version

ENSPTRT00000012904.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSPTRT00000012904.5 TP53BP1-203

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSPTRT00000012904.5 TP53BP1-203

Summary

About Us

Get help

Our sister sites

Follow us