Transcript: ENSPTRT00000017546.6 BPTF-202

Description

bromodomain PHD finger transcription factor [Source:VGNC Symbol;Acc:VGNC:9224]

Location

About this transcript

This transcript has 30 exons, is annotated with 120 domains and features and maps to 1365 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000017546.6	BPTF-202	11225	3043aa	ENSPTRP00000016254.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QDQ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000106332.1	BPTF-201	9678	2917aa	ENSPTRP00000073942.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SA61	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 30, Coding exons: 30, Transcript length: 11,225 bps, Translation length: 3,043 residues

Version

ENSPTRT00000017546.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.