Transcript: ENSPTRT00000025448.5 SPO11-201

Description

SPO11 initiator of meiotic double strand breaks [Source:VGNC Symbol;Acc:VGNC:10268]

Location

About this transcript

This transcript has 13 exons, is annotated with 28 domains and features and maps to 399 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000025448.5	SPO11-201	2318	396aa	ENSPTRP00000023491.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XY11 H2QKM8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000088893.1	SPO11-202	2204	358aa	ENSPTRP00000076968.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SKG0 A0A6D2W4X0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,318 bps, Translation length: 396 residues

Version

ENSPTRT00000025448.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.