Transcript: ENSPTRT00000011753.4 HIF1A-205

Description

hypoxia inducible factor 1 subunit alpha [Source:VGNC Symbol;Acc:VGNC:8202]

Location

Chromosome 14: 45,995,674-46,053,853 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 40 domains and features and maps to 677 oligo probes.

Gene

This transcript is a product of gene ENSPTRG00000006419.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000011753.4	HIF1A-205	3734	850aa	ENSPTRP00000010887.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WHZ5 H2Q8F3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000077990.1	HIF1A-201	4105	826aa	ENSPTRP00000078653.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2VTV6 K7D4V4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000078917.1	HIF1A-202	3930	735aa	ENSPTRP00000071638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2W463 K7DRZ3	-
ENSPTRT00000100399.1	HIF1A-206	2445	814aa	ENSPTRP00000065130.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RKE9	-
ENSPTRT00000092720.1	HIF1A-207	2418	805aa	ENSPTRP00000061910.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RBA6	-
ENSPTRT00000101884.1	HIF1A-203	2397	798aa	ENSPTRP00000081924.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SY46	-
ENSPTRT00000082189.1	HIF1A-204	2274	757aa	ENSPTRP00000081091.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SVP9	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 3,734 bps, Translation length: 850 residues

Version

ENSPTRT00000011753.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSPTRT00000011753.4 HIF1A-205

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Transcript: ENSPTRT00000011753.4 HIF1A-205

Summary

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