Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NEDD4L ENSPTRG00000010051

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Description

NEDD4 like E3 ubiquitin protein ligase [Source:VGNC Symbol;Acc:VGNC:84274]

Location

Chromosome 18: 55,432,184-55,800,204 forward strand.

Pan_tro_3.0:CM000332.3

About this gene

This gene has 10 transcripts (splice variants), 203 orthologues and 27 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000093139.1	NEDD4L-209	5386	1254aa	ENSPTRP00000062932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3REX5 A0A663DCV3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000096666.1	NEDD4L-205	6058	993aa	ENSPTRP00000069349.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RXL8	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000065473.3	NEDD4L-206	6004	975aa	ENSPTRP00000057037.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A663DG91 H2RCB1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000099999.1	NEDD4L-210	3672	1223aa	ENSPTRP00000067547.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RS67	-
ENSPTRT00000097182.1	NEDD4L-207	2904	967aa	ENSPTRP00000071851.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S4U5 A0A663DER4	-
ENSPTRT00000084024.1	NEDD4L-202	2868	955aa	ENSPTRP00000066882.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A663D9Y8 K7BRG0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000100147.1	NEDD4L-203	2736	911aa	ENSPTRP00000093487.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TWY1 A0A663D7E5	-
ENSPTRT00000085736.1	NEDD4L-204	2616	871aa	ENSPTRP00000083917.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T3W4 A0A663D6F2	-
ENSPTRT00000104143.1	NEDD4L-208	2601	866aa	ENSPTRP00000072245.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S5H0	-
ENSPTRT00000109363.1	NEDD4L-201	321	106aa	ENSPTRP00000078910.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SPL5	-

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Summary

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