Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: BTRC ENSPTRG00000002869

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Description

beta-transducin repeat containing E3 ubiquitin protein ligase [Source:VGNC Symbol;Acc:VGNC:13047]

Location

Chromosome 10: 102,804,833-103,006,308 forward strand.

Pan_tro_3.0:CM000324.3

About this gene

This gene has 10 transcripts (splice variants), 142 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000108283.1	BTRC-202	6145	605aa	ENSPTRP00000077054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XBK7 K7CWH9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000087200.1	BTRC-201	6072	579aa	ENSPTRP00000085211.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T7K6 A0A6D2XCZ5	-
ENSPTRT00000089483.1	BTRC-204	1812	603aa	ENSPTRP00000078586.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SPZ1	-
ENSPTRT00000064287.3	BTRC-205	1803	600aa	ENSPTRP00000055839.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2RBK5	-
ENSPTRT00000101107.1	BTRC-206	1713	570aa	ENSPTRP00000089909.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TL06	-
ENSPTRT00000103160.1	BTRC-203	1710	569aa	ENSPTRP00000091015.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2W6R1 K7B0U8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000098341.1	BTRC-209	1710	569aa	ENSPTRP00000084995.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T6X2	-
ENSPTRT00000106877.1	BTRC-208	1668	555aa	ENSPTRP00000066580.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RPK1	-
ENSPTRT00000110434.1	BTRC-210	1533	510aa	ENSPTRP00000065621.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RLU2	-
ENSPTRT00000082554.1	BTRC-207	1272	423aa	ENSPTRP00000080588.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SUC3	-

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Summary

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