intersectin 1 [Source:VGNC Symbol;Acc:VGNC:1150]
Chromosome 21: 20,163,605-20,333,026 forward strand.
Pan_tro_3.0:CM004190.1
This gene has 9 transcripts (splice variants), 227 orthologues and 13 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSPTRT00000085015.1 | ITSN1-207 | 5523 | 1721aa | ENSPTRP00000083303.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3T257 A0A6D2X5H9 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| ENSPTRT00000109616.1 | ITSN1-208 | 5508 | 1716aa | ENSPTRP00000092031.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3TST5 A0A6D2XX22 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000084525.1 | ITSN1-205 | 5173 | 1220aa | ENSPTRP00000091438.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3TQB7 A0A6D2XKJ0 | - |
| ENSPTRT00000060581.4 | ITSN1-206 | 5145 | 1714aa | ENSPTRP00000053973.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H2RAJ0 | - |
| ENSPTRT00000096362.1 | ITSN1-204 | 3519 | 1172aa | ENSPTRP00000066660.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3RV20 | - |
| ENSPTRT00000100204.1 | ITSN1-202 | 3063 | 1020aa | ENSPTRP00000090439.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3TND5 A0A6D2W172 | - |
| ENSPTRT00000086398.1 | ITSN1-203 | 2634 | 877aa | ENSPTRP00000062230.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3RC61 A0A6D2W8V7 | - |
| ENSPTRT00000086165.1 | ITSN1-209 | 714 | 237aa | ENSPTRP00000079339.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3SQP5 A0A6D2WK89 | - |
| ENSPTRT00000088604.1 | ITSN1-201 | 318 | 105aa | ENSPTRP00000068463.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3SIT0 | - |
