Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: BRPF1 ENSPTRG00000014592

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Description

bromodomain and PHD finger containing 1 [Source:VGNC Symbol;Acc:VGNC:1747]

Location

Chromosome 3: 9,969,629-9,986,148 forward strand.

Pan_tro_3.0:CM000317.3

About this gene

This gene has 4 transcripts (splice variants), 210 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000091128.1	BRPF1-201	5083	1253aa	ENSPTRP00000074426.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SBS0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000058577.4	BRPF1-202	4980	1220aa	ENSPTRP00000051595.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2X9A5 K7C1M7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000099970.1	BRPF1-203	4677	1119aa	ENSPTRP00000069514.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RY38 A0A6D2VYL2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000104135.1	BRPF1-204	1404	467aa	ENSPTRP00000076711.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SI41	-

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Summary

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