Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: UBC ENSPTRG00000030043

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Description

ubiquitin C [Source:NCBI gene (formerly Entrezgene);Acc:467151]

Gene Synonyms

ubiquitin

Location

Chromosome 12: 128,401,541-128,408,288 reverse strand.

Pan_tro_3.0:CM000326.3

About this gene

This gene has 9 transcripts (splice variants), 60 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000057986.3	UBC-206	2082	693aa	ENSPTRP00000050925.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2R7W7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000084321.1	UBC-207	1800	599aa	ENSPTRP00000076889.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SIQ6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000061629.4	UBC-203	1188	395aa	ENSPTRP00000054169.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2RAM8	-
ENSPTRT00000089026.1	UBC-208	690	229aa	ENSPTRP00000065840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RMA8	-
ENSPTRT00000092776.1	UBC-202	636	211aa	ENSPTRP00000083228.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T2X1	-
ENSPTRT00000078622.1	UBC-201	582	193aa	ENSPTRP00000073544.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SAM5	-
ENSPTRT00000083847.1	UBC-209	540	179aa	ENSPTRP00000065100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RKC0	-
ENSPTRT00000080750.1	UBC-205	516	171aa	ENSPTRP00000067420.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RRW0	-
ENSPTRT00000078875.1	UBC-204	498	165aa	ENSPTRP00000072271.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S5N4	-

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Summary

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