Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: UBR2 ENSPTRG00000018171

.

Description

ubiquitin protein ligase E3 component n-recognin 2 [Source:VGNC Symbol;Acc:VGNC:12739]

Location

Chromosome 6: 43,032,617-43,174,928 forward strand.

Pan_tro_3.0:CM000320.3

About this gene

This gene has 4 transcripts (splice variants), 216 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000079032.1	UBR2-201	7977	1755aa	ENSPTRP00000061650.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XQY3 K7C394	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000057275.4	UBR2-202	7976	1755aa	ENSPTRP00000050136.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2VSU4 K7ADR9	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000108814.1	UBR2-203	5235	1744aa	ENSPTRP00000088722.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3THL6	-
ENSPTRT00000079205.1	UBR2-204	1320	439aa	ENSPTRP00000069236.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RX06 A0A6D2WZL3	-

.

Summary

.

.