Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TRAF3IP2 ENSPTRG00000018510

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Description

TRAF3 interacting protein 2 [Source:VGNC Symbol;Acc:VGNC:3755]

Location

Chromosome 6: 115,164,468-115,212,039 reverse strand.

Pan_tro_3.0:CM000320.3

About this gene

This gene has 2 transcripts (splice variants) and 91 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000034205.4	TRAF3IP2-202	1725	574aa	ENSPTRP00000031614.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8PU88 A0A6D2X9Y0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000044378.5	TRAF3IP2-201	2845	565aa	ENSPTRP00000046535.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2Y4Y1 K7A7S7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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