Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: UBE3D ENSPTRG00000018377

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Description

ubiquitin protein ligase E3D [Source:VGNC Symbol;Acc:VGNC:3782]

Location

Chromosome 6: 85,952,521-86,127,342 reverse strand.

Pan_tro_3.0:CM000320.3

About this gene

This gene has 3 transcripts (splice variants) and 196 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000033984.3	UBE3D-201	1945	389aa	ENSPTRP00000031404.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2Y3U2 H2QTB8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000091266.1	UBE3D-202	846	122aa	ENSPTRP00000072185.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S5B6 A0A6D2X4V3	-
ENSPTRT00000104224.1	UBE3D-203	114	37aa	ENSPTRP00000076793.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8PVM9 A0A6D2XSE7	-

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Summary

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