Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TRIO ENSPTRG00000016735

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Description

trio Rho guanine nucleotide exchange factor [Source:VGNC Symbol;Acc:VGNC:4211]

Location

Chromosome 5: 14,430,980-14,796,669 forward strand.

Pan_tro_3.0:CM000319.3

About this gene

This gene has 6 transcripts (splice variants), 233 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000031086.5	TRIO-201	9291	3096aa	ENSPTRP00000028715.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2VXU2 H2QQN5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000087874.1	TRIO-203	9075	3024aa	ENSPTRP00000075364.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SEE6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000086297.1	TRIO-202	7488	2495aa	ENSPTRP00000085800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T970	-
ENSPTRT00000107877.1	TRIO-206	1791	596aa	ENSPTRP00000067089.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RQY8 A0A6D2X212	-
ENSPTRT00000106337.1	TRIO-204	1518	505aa	ENSPTRP00000078713.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SP53	-
ENSPTRT00000078025.1	TRIO-205	768	255aa	ENSPTRP00000069596.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RY10 A0A6D2VTD2	-

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Summary

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