Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: STXBP5L ENSPTRG00000015274

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Description

syntaxin binding protein 5L [Source:VGNC Symbol;Acc:VGNC:2597]

Location

Chromosome 3: 124,054,332-124,585,605 forward strand.

Pan_tro_3.0:CM000317.3

About this gene

This gene has 5 transcripts (splice variants), 214 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000028527.6	STXBP5L-201	3827	1186aa	ENSPTRP00000026328.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XFF5 H2QN67	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000089230.1	STXBP5L-203	3522	1173aa	ENSPTRP00000082548.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T117	-
ENSPTRT00000105714.1	STXBP5L-204	3489	1162aa	ENSPTRP00000074862.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SEE2 A0A6D2XCC3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000104344.1	STXBP5L-202	3003	1000aa	ENSPTRP00000082755.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T0K7 A0A6D2VVF2	-
ENSPTRT00000086764.1	STXBP5L-205	1752	583aa	ENSPTRP00000080290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SUP3	-

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Summary

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