Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SETD2 ENSPTRG00000014866

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Description

SET domain containing 2, histone lysine methyltransferase [Source:VGNC Symbol;Acc:VGNC:2562]

Location

Chromosome 3: 48,018,443-48,165,756 reverse strand.

Pan_tro_3.0:CM000317.3

About this gene

This gene has 2 transcripts (splice variants), 168 orthologues and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000027789.5	SETD2-201	8472	2564aa	ENSPTRP00000025629.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A663D893 K7D2K6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000087589.1	SETD2-202	7611	2536aa	ENSPTRP00000080274.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3STJ2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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