Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PATZ1 ENSPTRG00000014268

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Description

POZ/BTB and AT hook containing zinc finger 1 [Source:VGNC Symbol;Acc:VGNC:12910]

Location

Chromosome 22: 17,923,052-17,943,842 reverse strand.

Pan_tro_3.0:CM000335.3

About this gene

This gene has 6 transcripts (splice variants), 201 orthologues and 38 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000026663.5	PATZ1-201	4095	687aa	ENSPTRP00000024578.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WHV6 H2QLI5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000078392.1	PATZ1-202	3957	641aa	ENSPTRP00000074822.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XVY7 K7CNL0	-
ENSPTRT00000111251.1	PATZ1-206	3286	537aa	ENSPTRP00000069773.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WQN0 K7B838	-
ENSPTRT00000078063.1	PATZ1-203	1956	651aa	ENSPTRP00000066291.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RNK9	-
ENSPTRT00000094407.1	PATZ1-204	1737	578aa	ENSPTRP00000081155.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SX48	-
ENSPTRT00000100409.1	PATZ1-205	294	97aa	ENSPTRP00000092805.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TU60	-

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Summary

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