Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
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Genetic Variation
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Gene: HAT1 ENSPTRG00000012637

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Description

histone acetyltransferase 1 [Source:VGNC Symbol;Acc:VGNC:1956]

Location

Chromosome 2B: 62,187,968-62,257,498 forward strand.

Pan_tro_3.0:CM000316.3

About this gene

This gene has 4 transcripts (splice variants) and 207 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000023416.4	HAT1-201	1638	419aa	ENSPTRP00000021597.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WXR9 H2QIZ3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000102551.1	HAT1-202	2480	413aa	ENSPTRP00000090207.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TLU7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000090651.1	HAT1-203	1188	395aa	ENSPTRP00000075318.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SEA1	-
ENSPTRT00000090419.1	HAT1-204	372	123aa	ENSPTRP00000070369.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S053	-

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Summary

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