Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SPOP ENSPTRG00000009380

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Description

speckle type BTB/POZ protein [Source:VGNC Symbol;Acc:VGNC:9653]

Location

Chromosome 17: 48,713,569-48,761,625 reverse strand.

Pan_tro_3.0:CM000331.3

About this gene

This gene has 2 transcripts (splice variants), 343 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000017208.4	SPOP-201	3480	374aa	ENSPTRP00000015931.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XQ62 H2QDD5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000107634.1	SPOP-202	891	296aa	ENSPTRP00000070550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S117	-

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Summary

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