Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VPS18 ENSPTRG00000006936

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Description

VPS18 core subunit of CORVET and HOPS complexes [Source:VGNC Symbol;Acc:VGNC:2463]

Location

Chromosome 15: 21,384,730-21,394,277 forward strand.

Pan_tro_3.0:CM000329.3

About this gene

This gene has 3 transcripts (splice variants), 199 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000012787.3	VPS18-201	3912	973aa	ENSPTRP00000011838.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XTZ1 H2Q973	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000103880.1	VPS18-203	417	138aa	ENSPTRP00000080116.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SSZ3	-
ENSPTRT00000096559.1	VPS18-202	366	121aa	ENSPTRP00000074410.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SBI7 A0A6D2WTH3	-

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Summary

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