Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NCAPD3 ENSPTRG00000004493

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Description

non-SMC condensin II complex subunit D3 [Source:VGNC Symbol;Acc:VGNC:3096]

Location

Chromosome 11: 134,844,730-134,915,025 reverse strand.

Pan_tro_3.0:CM000325.3

About this gene

This gene has 4 transcripts (splice variants), 193 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000008322.6	NCAPD3-201	5170	1498aa	ENSPTRP00000007685.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2X8W2 K7ANE6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000100062.1	NCAPD3-202	4479	1492aa	ENSPTRP00000078868.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SPL9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000085780.1	NCAPD3-203	2481	826aa	ENSPTRP00000073404.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SA82	-
ENSPTRT00000086501.1	NCAPD3-204	114	37aa	ENSPTRP00000074234.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SBK9 A0A6D2WCU2	-

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Summary

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