Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: FCHSD2 ENSPTRG00000004040

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Description

FCH and double SH3 domains 2 [Source:VGNC Symbol;Acc:VGNC:11354]

Location

Chromosome 11: 72,770,010-73,080,827 reverse strand.

Pan_tro_3.0:CM000325.3

About this gene

This gene has 5 transcripts (splice variants), 285 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000109953.1	FCHSD2-202	5148	764aa	ENSPTRP00000092806.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TUA1 A0A6D2X9M7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000078765.1	FCHSD2-203	5076	740aa	ENSPTRP00000082328.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XWY2 K7AP78	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000088919.1	FCHSD2-201	4639	604aa	ENSPTRP00000067614.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RSI9 A0A6D2XZZ6	-
ENSPTRT00000007530.5	FCHSD2-205	2085	694aa	ENSPTRP00000006947.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2Q4D1	-
ENSPTRT00000095318.1	FCHSD2-204	306	101aa	ENSPTRP00000067947.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RUE8 A0A6D2XYM4	-

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Summary

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