Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SART1 ENSPTRG00000003905

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Description

spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP [Source:VGNC Symbol;Acc:VGNC:1009]

Location

Chromosome 11: 66,033,275-66,074,013 forward strand.

Pan_tro_3.0:CM000325.3

About this gene

This gene has 4 transcripts (splice variants) and 156 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000007298.6	SART1-201	2671	800aa	ENSPTRP00000006733.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WUZ1 K7AQ90	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000077018.1	SART1-202	2367	788aa	ENSPTRP00000062495.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RDM7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000099199.1	SART1-203	2355	784aa	ENSPTRP00000078682.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SNV5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000076912.1	SART1-204	1545	514aa	ENSPTRP00000088264.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3THB6	-

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Summary

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