Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: UBXN1 ENSPTRG00000003780

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Description

UBX domain protein 1 [Source:VGNC Symbol;Acc:VGNC:953]

Location

Chromosome 11: 62,646,576-62,649,167 reverse strand.

Pan_tro_3.0:CM000325.3

About this gene

This gene has 4 transcripts (splice variants), 192 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000007043.4	UBXN1-204	1071	310aa	ENSPTRP00000006496.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XP10 H2Q3W4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000083853.1	UBXN1-201	1070	297aa	ENSPTRP00000074509.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SCD4 A0A6D2XQZ9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000078846.1	UBXN1-203	717	238aa	ENSPTRP00000068567.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RV18 A0A6D2WV62	-
ENSPTRT00000104542.1	UBXN1-202	303	100aa	ENSPTRP00000091260.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TPV5 A0A6D2WGQ4	-

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Summary

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