Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: DCAF6 ENSPTRG00000001641

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Description

DDB1 and CUL4 associated factor 6 [Source:VGNC Symbol;Acc:VGNC:517]

Location

Chromosome 1: 146,195,202-146,333,159 forward strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 5 transcripts (splice variants), 220 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000002983.7	DCAF6-204	3610	951aa	ENSPTRP00000002737.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WKL4 H2Q0J5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000084010.1	DCAF6-201	3522	920aa	ENSPTRP00000078067.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SM33 A0A6D2Y4F5	-
ENSPTRT00000095671.1	DCAF6-202	3402	880aa	ENSPTRP00000087994.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WG88 K7DD46	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000101717.1	DCAF6-203	3342	860aa	ENSPTRP00000081353.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XMJ5 K7A0S4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000106934.1	DCAF6-205	2853	950aa	ENSPTRP00000091777.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TRD4	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

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Summary

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