Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: USP48 ENSPTRG00000000304

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Description

ubiquitin specific peptidase 48 [Source:VGNC Symbol;Acc:VGNC:10900]

Location

Chromosome 1: 20,778,862-20,888,321 reverse strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 4 transcripts (splice variants), 197 orthologues and 56 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000000599.4	USP48-201	6479	1035aa	ENSPTRP00000000527.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WN37 H2PY94	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000076869.1	USP48-203	2979	992aa	ENSPTRP00000089927.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TL09	-
ENSPTRT00000111048.1	USP48-202	2952	983aa	ENSPTRP00000072233.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S5D6 A0A6D2WHD6	-
ENSPTRT00000086011.1	USP48-204	825	274aa	ENSPTRP00000078693.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SP36	-

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Summary

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