Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SNX2 ENSPTRG00000028644

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Description

sorting nexin 2 [Source:VGNC Symbol;Acc:VGNC:4170]

Location

Chromosome 5: 122,599,834-122,656,543 forward strand.

Pan_tro_3.0:CM000319.3

About this gene

This gene has 2 transcripts (splice variants), 208 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000055572.5	SNX2-201	1689	519aa	ENSPTRP00000048102.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2W790 K7AMI8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000102837.1	SNX2-202	1455	484aa	ENSPTRP00000081470.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SWT8	-

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Summary

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