Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: BRPF3 ENSPTRG00000024347

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Description

bromodomain and PHD finger containing 3 [Source:VGNC Symbol;Acc:VGNC:2650]

Location

Chromosome 6: 36,573,048-36,609,134 forward strand.

Pan_tro_3.0:CM000320.3

About this gene

This gene has 6 transcripts (splice variants), 286 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000093771.1	BRPF3-201	6162	1205aa	ENSPTRP00000062671.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RE53 A0A6D2W5U2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000046259.5	BRPF3-202	5748	1106aa	ENSPTRP00000046383.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XK29 H2R407	-
ENSPTRT00000083492.1	BRPF3-203	5036	935aa	ENSPTRP00000078499.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SN78 A0A6D2W3F5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000085996.1	BRPF3-204	2616	871aa	ENSPTRP00000072333.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S716 A0A6D2WMX7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000095240.1	BRPF3-205	1881	626aa	ENSPTRP00000072477.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S683 A0A6D2XRA4	-
ENSPTRT00000080545.1	BRPF3-206	432	143aa	ENSPTRP00000061656.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RAI7	-

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Summary

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