Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
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Genetic Variation
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Gene: GLG1 ENSPTRG00000024158

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Description

golgi glycoprotein 1 [Source:VGNC Symbol;Acc:VGNC:13709]

Location

Chromosome 16: 65,391,695-65,562,926 reverse strand.

Pan_tro_3.0:CM000330.3

About this gene

This gene has 4 transcripts (splice variants) and 287 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000086714.1	GLG1-201	8260	1203aa	ENSPTRP00000069289.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2Y5Z3 K7CMT8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000048775.3	GLG1-202	3579	1192aa	ENSPTRP00000041730.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XLH6 H2R139	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000109114.1	GLG1-203	3216	1071aa	ENSPTRP00000087752.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TER7	-
ENSPTRT00000095399.1	GLG1-204	2097	698aa	ENSPTRP00000081854.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8Q6G6 A0A6D2W0H1	-

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Summary

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