Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: SRGAP3 ENSPTRG00000023245

.

Description

SLIT-ROBO Rho GTPase activating protein 3 [Source:VGNC Symbol;Acc:VGNC:8846]

Location

Chromosome 3: 9,222,650-9,484,588 reverse strand.

Pan_tro_3.0:CM000317.3

About this gene

This gene has 6 transcripts (splice variants), 264 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000043868.3	SRGAP3-201	3300	1099aa	ENSPTRP00000046711.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WCR8 H2R481	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000089293.1	SRGAP3-203	3270	1089aa	ENSPTRP00000082646.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T076	-
ENSPTRT00000102020.1	SRGAP3-202	3228	1075aa	ENSPTRP00000092264.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TSM3 A0A6D2XMU9	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000090170.1	SRGAP3-204	3174	1057aa	ENSPTRP00000077965.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SLX1	-
ENSPTRT00000090934.1	SRGAP3-205	1008	335aa	ENSPTRP00000069393.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RXF4 A0A6D2WG52	-
ENSPTRT00000100290.1	SRGAP3-206	999	332aa	ENSPTRP00000077124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SKV2	-

.

Summary

.

.