Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SNX12 ENSPTRG00000022003

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Description

sorting nexin 12 [Source:VGNC Symbol;Acc:VGNC:11635]

Location

Chromosome X: 70,477,351-70,492,940 reverse strand.

Pan_tro_3.0:CM000336.3

About this gene

This gene has 4 transcripts (splice variants), 212 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000083095.1	SNX12-201	525	174aa	ENSPTRP00000072419.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S5V9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000080048.1	SNX12-203	3327	162aa	ENSPTRP00000089547.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2Y505 K7BFD5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000088470.1	SNX12-202	519	172aa	ENSPTRP00000063709.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RGC8 A0A6D2XC93	-
ENSPTRT00000040938.4	SNX12-204	501	166aa	ENSPTRP00000037823.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QYS0	-

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Summary

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