Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TBC1D31 ENSPTRG00000020547

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Description

TBC1 domain family member 31 [Source:VGNC Symbol;Acc:VGNC:3002]

Location

Chromosome 8: 125,487,487-125,567,788 forward strand.

Pan_tro_3.0:CM000322.4

About this gene

This gene has 7 transcripts (splice variants), 201 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000038016.3	TBC1D31-204	3721	1066aa	ENSPTRP00000035142.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XXB8 H2QWN5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000104879.1	TBC1D31-205	4186	961aa	ENSPTRP00000089615.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TK11 A0A6D2W307	-
ENSPTRT00000093509.1	TBC1D31-203	3531	1001aa	ENSPTRP00000077962.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SLS1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000110517.1	TBC1D31-202	3490	620aa	ENSPTRP00000066207.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RNH2 A0A6D2XH26	-
ENSPTRT00000102392.1	TBC1D31-201	3444	970aa	ENSPTRP00000085738.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T967 A0A6D2W9V6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000088327.1	TBC1D31-206	2889	962aa	ENSPTRP00000062245.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RC81	-
ENSPTRT00000100678.1	TBC1D31-207	2820	939aa	ENSPTRP00000064782.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RJD9	-

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Summary

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