Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SRPK2 ENSPTRG00000019564

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Description

SRSF protein kinase 2 [Source:VGNC Symbol;Acc:VGNC:4516]

Location

Chromosome 7: 109,377,437-109,670,395 reverse strand.

Pan_tro_3.0:CM000321.4

About this gene

This gene has 8 transcripts (splice variants), 204 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000093548.1	SRPK2-203	2097	698aa	ENSPTRP00000087950.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2W7Y4 K7AQP5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000043759.4	SRPK2-202	3556	687aa	ENSPTRP00000045837.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2YC28 K7A8Q2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000087456.1	SRPK2-201	2548	146aa	ENSPTRP00000071596.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S440	-
ENSPTRT00000108773.1	SRPK2-205	2052	683aa	ENSPTRP00000069713.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RYB1	-
ENSPTRT00000076675.1	SRPK2-204	2007	668aa	ENSPTRP00000075247.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SE34	-
ENSPTRT00000100572.1	SRPK2-206	2001	666aa	ENSPTRP00000070134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RZH1	-
ENSPTRT00000096207.1	SRPK2-207	471	156aa	ENSPTRP00000075419.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SEK1	-
ENSPTRT00000086304.1	SRPK2-208	207	68aa	ENSPTRP00000064305.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RI25 A0A6D2Y464	-

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Summary

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