Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: OGDH ENSPTRG00000019149

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Description

oxoglutarate dehydrogenase [Source:VGNC Symbol;Acc:VGNC:8708]

Location

Chromosome 7: 44,094,061-44,197,135 forward strand.

Pan_tro_3.0:CM000321.4

About this gene

This gene has 7 transcripts (splice variants), 284 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000035386.5	OGDH-201	4363	1038aa	ENSPTRP00000032714.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XF61 H2QUI7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000079877.1	OGDH-202	4351	1034aa	ENSPTRP00000092494.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TTC8 A0A6D2WSL2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000090374.1	OGDH-203	4318	1023aa	ENSPTRP00000081758.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WY86 K7CRV4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000077328.1	OGDH-204	4306	1019aa	ENSPTRP00000071182.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S2G3 A0A6D2X686	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000078557.1	OGDH-205	2622	873aa	ENSPTRP00000078717.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SNZ2 A0A6D2WP43	-
ENSPTRT00000097674.1	OGDH-206	1161	386aa	ENSPTRP00000078394.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SMX9	-
ENSPTRT00000093364.1	OGDH-207	1095	364aa	ENSPTRP00000090388.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TMC6	-

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Summary

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