Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ILRUN ENSPTRG00000018068

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Description

inflammation and lipid regulator with UBA-like and NBR1-like domains [Source:VGNC Symbol;Acc:VGNC:2762]

Gene Synonyms

C6H6ORF106

Location

Chromosome 6: 34,905,083-35,016,146 reverse strand.

Pan_tro_3.0:CM000320.3

About this gene

This gene has 6 transcripts (splice variants), 248 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000042680.4	ILRUN-201	4415	298aa	ENSPTRP00000039304.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WQ06 K7DPL6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000080691.1	ILRUN-202	4217	232aa	ENSPTRP00000093353.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2YBW0 K7B5L9	-
ENSPTRT00000080827.1	ILRUN-206	852	283aa	ENSPTRP00000093771.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TWZ1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000094684.1	ILRUN-205	849	282aa	ENSPTRP00000064265.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RHZ1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000077718.1	ILRUN-204	699	232aa	ENSPTRP00000092093.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TS85	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000087320.1	ILRUN-203	678	225aa	ENSPTRP00000071132.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S2B7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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