Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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Gene: WDR46 ENSPTRG00000018040

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Description

WD repeat domain 46 [Source:VGNC Symbol;Acc:VGNC:11708]

Location

Chromosome 6: 33,604,520-33,614,955 reverse strand.

Pan_tro_3.0:CM000320.3

About this gene

This gene has 2 transcripts (splice variants) and 186 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000033348.5	WDR46-201	2358	610aa	ENSPTRP00000030811.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WEA1 H2QST0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000089164.1	WDR46-202	1794	597aa	ENSPTRP00000082117.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SYU2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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