Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
- Gene history

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Gene: ATAT1 ENSPTRG00000017933

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Description

alpha tubulin acetyltransferase 1 [Source:VGNC Symbol;Acc:VGNC:51992]

Location

Chromosome 6: 30,815,470-30,838,267 forward strand.

Pan_tro_3.0:CM000320.3

About this gene

This gene has 5 transcripts (splice variants) and 191 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000033114.6	ATAT1-203	1873	423aa	ENSPTRP00000030594.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XJ40 H2QSM2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000102584.1	ATAT1-201	2531	333aa	ENSPTRP00000072760.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S7F7 A0A6D2XLU8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000101556.1	ATAT1-202	2462	310aa	ENSPTRP00000071135.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S2B6 A0A6D2WXS4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000076730.1	ATAT1-204	936	311aa	ENSPTRP00000087452.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TF13	-
ENSPTRT00000084288.1	ATAT1-205	540	179aa	ENSPTRP00000061718.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RAS1	-

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Summary

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