Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
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Genetic Variation
- Variant table
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- Structural variants
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Gene: UIMC1 ENSPTRG00000017572

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Description

ubiquitin interaction motif containing 1 [Source:VGNC Symbol;Acc:VGNC:4219]

Location

Chromosome 5: 177,557,004-177,667,136 reverse strand.

Pan_tro_3.0:CM000319.3

About this gene

This gene has 3 transcripts (splice variants) and 188 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000100810.1	UIMC1-203	2169	722aa	ENSPTRP00000078622.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SNP5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000032478.6	UIMC1-201	2666	721aa	ENSPTRP00000043417.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2Y638 H2R255	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000077190.1	UIMC1-202	1056	351aa	ENSPTRP00000072941.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S7Z3 A0A6D2WZS7	-

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Summary

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