Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: GABRA1 ENSPTRG00000017499

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Description

gamma-aminobutyric acid type A receptor subunit alpha1 [Source:VGNC Symbol;Acc:VGNC:8618]

Location

Chromosome 5: 162,201,423-162,254,250 forward strand.

Pan_tro_3.0:CM000319.3

About this gene

This gene has 5 transcripts (splice variants), 202 orthologues and 49 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000095155.1	GABRA1-203	1416	471aa	ENSPTRP00000074687.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SDV7 A0A6D2VXI4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000032353.6	GABRA1-201	4352	459aa	ENSPTRP00000029894.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QRY4	-
ENSPTRT00000107585.1	GABRA1-202	1389	462aa	ENSPTRP00000077046.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SJ18	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000090713.1	GABRA1-205	1110	369aa	ENSPTRP00000085637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T8T0	-
ENSPTRT00000078312.1	GABRA1-204	963	320aa	ENSPTRP00000073181.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S8M0	-

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Summary

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