Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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Ontologies
- GO: Anatomical entity
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Genetic Variation
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Gene: DCTN4 ENSPTRG00000017424

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Description

dynactin subunit 4 [Source:VGNC Symbol;Acc:VGNC:3965]

Location

Chromosome 5: 150,914,012-150,964,056 reverse strand.

Pan_tro_3.0:CM000319.3

About this gene

This gene has 3 transcripts (splice variants) and 205 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000032229.4	DCTN4-201	3921	467aa	ENSPTRP00000047903.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WF78 H2R581	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000095020.1	DCTN4-202	3891	460aa	ENSPTRP00000072000.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WJI3 K7AX10	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000081281.1	DCTN4-203	261	86aa	ENSPTRP00000078931.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8NJP2 A0A6D2VVB0	-

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Summary

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