Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CHD1 ENSPTRG00000017103

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Description

chromodomain helicase DNA binding protein 1 [Source:VGNC Symbol;Acc:VGNC:3950]

Location

Chromosome 5: 98,288,166-98,361,632 reverse strand.

Pan_tro_3.0:CM000319.3

About this gene

This gene has 2 transcripts (splice variants), 209 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000031693.4	CHD1-201	6595	1710aa	ENSPTRP00000029279.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8KJR8 A0A6D2W393	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000095971.1	CHD1-202	5100	1699aa	ENSPTRP00000089667.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TKB2	-

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Summary

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