Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VCAN ENSPTRG00000017055

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Description

versican [Source:VGNC Symbol;Acc:VGNC:4221]

Location

Chromosome 5: 32,088,504-32,199,413 reverse strand.

Pan_tro_3.0:CM000319.3

About this gene

This gene has 4 transcripts (splice variants), 316 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000031608.5	VCAN-201	12633	3396aa	ENSPTRP00000029197.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QR70	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000095988.1	VCAN-202	9672	2409aa	ENSPTRP00000090984.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TP34	-
ENSPTRT00000082900.1	VCAN-203	7371	1642aa	ENSPTRP00000066081.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RN01 A0A663DDH0	-
ENSPTRT00000093384.1	VCAN-204	1968	655aa	ENSPTRP00000068454.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RUQ2 A0A663DBH4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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