Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TNPO1 ENSPTRG00000016972

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Description

transportin 1 [Source:VGNC Symbol;Acc:VGNC:4207]

Location

Chromosome 5: 42,975,228-43,073,022 reverse strand.

Pan_tro_3.0:CM000319.3

About this gene

This gene has 5 transcripts (splice variants), 212 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000031475.5	TNPO1-201	8560	898aa	ENSPTRP00000029071.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WYC3 H2QR21	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000105254.1	TNPO1-203	8539	219aa	ENSPTRP00000084047.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T488	-
ENSPTRT00000104809.1	TNPO1-202	8473	869aa	ENSPTRP00000072754.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S6T0	-
ENSPTRT00000105562.1	TNPO1-205	2667	888aa	ENSPTRP00000093627.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TXB6	-
ENSPTRT00000099032.1	TNPO1-204	2547	848aa	ENSPTRP00000076930.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SJ69 A0A6D2VXH1	-

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Summary

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