Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: STAG1 ENSPTRG00000015432

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Description

STAG1 cohesin complex component [Source:VGNC Symbol;Acc:VGNC:2595]

Location

Chromosome 3: 139,699,741-140,002,714 reverse strand.

Pan_tro_3.0:CM000317.3

About this gene

This gene has 7 transcripts (splice variants), 224 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000101819.1	STAG1-201	5905	1258aa	ENSPTRP00000086284.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TAP7 A0A6D2X4I9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000088839.1	STAG1-202	5792	1221aa	ENSPTRP00000073074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S990 A0A6D2WMA6	-
ENSPTRT00000041473.4	STAG1-204	3765	1254aa	ENSPTRP00000038306.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QZ32	-
ENSPTRT00000106569.1	STAG1-205	3357	1118aa	ENSPTRP00000072495.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S6P2	-
ENSPTRT00000089576.1	STAG1-203	2997	998aa	ENSPTRP00000074975.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SD63 A0A6D2XMC5	-
ENSPTRT00000111283.1	STAG1-206	699	232aa	ENSPTRP00000068146.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RTV9 A0A6D2YBJ5	-
ENSPTRT00000105955.1	STAG1-207	486	161aa	ENSPTRP00000063113.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8QJ50 A0A6D2YCQ3	-

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Summary

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