Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: UBA3 ENSPTRG00000015095

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Description

ubiquitin like modifier activating enzyme 3 [Source:VGNC Symbol;Acc:VGNC:7136]

Location

Chromosome 3: 70,382,046-70,406,915 reverse strand.

Pan_tro_3.0:CM000317.3

About this gene

This gene has 6 transcripts (splice variants), 266 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000046787.4	UBA3-203	1392	463aa	ENSPTRP00000043591.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2W6B8 H2R294	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000077497.1	UBA3-201	1353	450aa	ENSPTRP00000088507.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TGY6	-
ENSPTRT00000091873.1	UBA3-204	1350	449aa	ENSPTRP00000075157.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SF87 A0A6D2WDK7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000086001.1	UBA3-202	1332	443aa	ENSPTRP00000070486.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S0J2	-
ENSPTRT00000102573.1	UBA3-205	1269	422aa	ENSPTRP00000068099.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RTP3 A0A6D2W5V5	-
ENSPTRT00000094202.1	UBA3-206	390	129aa	ENSPTRP00000079792.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8P755 A0A6D2XFF3	-

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Summary

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