Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TOM1 ENSPTRG00000014297

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Description

target of myb1 membrane trafficking protein [Source:VGNC Symbol;Acc:VGNC:5997]

Location

Chromosome 22: 21,894,197-21,946,260 forward strand.

Pan_tro_3.0:CM000335.3

About this gene

This gene has 5 transcripts (splice variants), 293 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000026711.5	TOM1-201	2393	493aa	ENSPTRP00000024621.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QLK0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000076994.1	TOM1-202	1746	69aa	ENSPTRP00000086825.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TC93 A0A6D2WWN6	-
ENSPTRT00000078627.1	TOM1-205	1416	471aa	ENSPTRP00000068514.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RW31	-
ENSPTRT00000103330.1	TOM1-204	1344	447aa	ENSPTRP00000083963.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T407	-
ENSPTRT00000107721.1	TOM1-203	294	97aa	ENSPTRP00000077348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SJX3 A0A6D2XUE3	-

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Summary

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