Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
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Gene: WDR4 ENSPTRG00000013948

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Description

WD repeat domain 4 [Source:VGNC Symbol;Acc:VGNC:1113]

Location

Chromosome 21: 29,391,439-29,421,767 reverse strand.

Pan_tro_3.0:CM004190.1

About this gene

This gene has 2 transcripts (splice variants) and 189 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000026020.4	WDR4-201	2149	412aa	ENSPTRP00000024006.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2W0G2 H2QL33	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000085684.1	WDR4-202	1212	403aa	ENSPTRP00000089857.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TKV4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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