Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: USP25 ENSPTRG00000013793

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Description

ubiquitin specific peptidase 25 [Source:VGNC Symbol;Acc:VGNC:14830]

Location

Chromosome 21: 2,161,717-2,309,702 forward strand.

Pan_tro_3.0:CM004190.1

About this gene

This gene has 5 transcripts (splice variants), 206 orthologues and 56 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000100012.1	USP25-201	4323	1125aa	ENSPTRP00000068899.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RW24 A0A6D2XDS8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000107668.1	USP25-203	4136	1087aa	ENSPTRP00000074379.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SC06 A0A6D2W6Q8	-
ENSPTRT00000098945.1	USP25-202	4113	1055aa	ENSPTRP00000091160.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TPK5 A0A6D2X7V3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000025751.3	USP25-205	3147	1048aa	ENSPTRP00000023767.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QKV1	-
ENSPTRT00000087860.1	USP25-204	1353	450aa	ENSPTRP00000063269.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RF30 A0A6D2VYT4	-

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Summary

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