Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: RBM38 ENSPTRG00000013661

.

Description

RNA binding motif protein 38 [Source:HGNC Symbol;Acc:HGNC:15818]

Location

Chromosome 20: 59,380,436-59,397,214 forward strand.

Pan_tro_3.0:CM000334.4

About this gene

This gene has 4 transcripts (splice variants), 225 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000091103.1	RBM38-204	624	207aa	ENSPTRP00000092717.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TUQ4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000025456.6	RBM38-202	525	174aa	ENSPTRP00000043513.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2R276	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000091911.1	RBM38-201	366	121aa	ENSPTRP00000070470.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S0U1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000084069.1	RBM38-203	234	77aa	ENSPTRP00000079216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SQI2 A0A6D2X350	-

.

Summary

.

.