Summary
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- Transcript comparison
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Gene: BCAS1 ENSPTRG00000013638

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Description

brain enriched myelin associated protein 1 [Source:VGNC Symbol;Acc:VGNC:10150]

Location

Chromosome 20: 55,812,025-55,930,601 reverse strand.

Pan_tro_3.0:CM000334.4

About this gene

This gene has 5 transcripts (splice variants) and 127 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000083779.1	BCAS1-201	3183	650aa	ENSPTRP00000090999.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TP53	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000103045.1	BCAS1-202	3141	636aa	ENSPTRP00000080868.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SWB1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000025418.5	BCAS1-203	1755	584aa	ENSPTRP00000023464.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2VV88 H2QKL4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000106868.1	BCAS1-204	1521	506aa	ENSPTRP00000084026.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T593 A0A6D2VX37	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000108467.1	BCAS1-205	1134	377aa	ENSPTRP00000070915.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S1P7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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