Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: MAP1LC3A ENSPTRG00000013417

.

Description

microtubule associated protein 1 light chain 3 alpha [Source:VGNC Symbol;Acc:VGNC:14258]

Location

Chromosome 20: 35,997,536-36,007,655 forward strand.

Pan_tro_3.0:CM000334.4

About this gene

This gene has 2 transcripts (splice variants), 190 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000024928.5	MAP1LC3A-201	378	125aa	ENSPTRP00000023008.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XKF7 H2QK79	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000024929.5	MAP1LC3A-202	1836	121aa	ENSPTRP00000023009.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2Y2G8 K7BI42	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Summary

.

.